I will save you my anti auto rhetoric and just answer your question.
If you can move it and segregate do it....you can pick the nanners off as they show. You won't get them all because they hide pretty good once the buds get size on them but you can get some smoke and hopefully not lose a lot of potency from your plant making seeds. Especially since auto smoke is generally not as potent as regular photo period smoke is....oh boy there I go bashing autos..... Lol. J/k